software

Bioinformatics software developed and/or maintained by CompMicroLab group members 🧰

Single-cell analysis

henriksson-lab/bascet henriksson-lab/bascet
henriksson-lab/zorn henriksson-lab/zorn

Microbial genome annotation

zellerlab/GECCO zellerlab/GECCO
lmc297/Sismis lmc297/Sismis

Bacterial taxonomy, typing, and risk evaluation

lmc297/bactaxR lmc297/bactaxR
lmc297/BTyper3 lmc297/BTyper3
althonos/orthoani althonos/orthoani
althonos/pyfastani althonos/pyfastani
althonos/pyskani althonos/pyskani

Databases and atlases

henriksson-lab/sismis_atlas henriksson-lab/sismis_atlas

Other software

zellerlab/IGUA zellerlab/IGUA
lmc297/besPLOT lmc297/besPLOT